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AUTODOCK GmbH autodock tools gui
Autodock Tools Gui, supplied by AUTODOCK GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/autodock+tools+gui/autodock+vina/10__1016_slash_j__sciaf__2024__e02340-115-0-0
Average 90 stars, based on 1 article reviews
autodock tools gui - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Enzyme-responsive biomimetic solid lipid nanoparticles for antibiotic delivery against hyaluronidase-secreting bacteria.
Article Snippet: In this work, a potent hyaluronidase inhibitor (ascorbyl stearate (AS)) was successfully employed to design vancomycin-loaded solid lipid nanoparticles (VCM-AS-SLNs) with biomimetic and enzyme-responsive features, to enhance the antibacterial efficacy of vancomycin against bacterial-induced sepsis.. The VCM-AS-SLNs prepared were biocompatible and had appropriate physicochemical parameters.. The VCM-AS-SLNs showed an excellent binding affinity to the bacterial lipase.

Article Title: Computational and theoretical insights into the cytotoxic prospects of compounds isolated from Elaeodendron buchananii against Leukemia
Article Snippet: AutoDock Tools GUI was used to estimate the ligand docking and adding of a partial Gasteiger charge.

Article Title: Computational insights into the antioxidant and antidiabetic mechanisms of cannabidiol: An in vitro and in silico study
Article Snippet: AutoDock Tools GUI was used to estimate the ligand docking and adding of a partial Gasteiger charge (Aljoundi et al., 2020).

Article Title: Exploring the inhibitory action of betulinic acid on key digestive enzymes linked to diabetes via in vitro and computational models: approaches to anti-diabetic mechanisms
Article Snippet: AutoDock Tools GUI was used to estimate the ligand docking and adding of a partial Gasteiger 30 48 3 − + charge [36,37] as the docking score results for indicated inhibitor bonded to pancreaticlipase, α-amylase, α-chymotrypsin and α-glucosidase enzymes are −5.5, −4.3, −6.4 and −5–2, respectively.

Article Title: The Unusual Architecture of RNA-Dependent RNA Polymerase (RdRp)’s Catalytic Chamber Provides a Potential Strategy for Combination Therapy against COVID-19
Article Snippet: AutoDock Tools GUI was used to describe the grid box at the catalytic site of the protein [ ].

Article Title: Investigation of Simultaneous and Sequential Cooperative Homotropic Inhibitor Binding to the Catalytic Chamber of SARS-CoV-2 RNA-dependent RNA Polymerase (RdRp).
Article Snippet: In our previous report, the unique architecture of the catalytic chamber of the SARS-CoV-2 RNA-dependent RNA polymerase (RdRp), which harbours two distinctive binding sites, was fully characterized at molecular level.. The significant differences in the two binding sites BS1 and BS2 in terms of binding pockets motif, as well as the preferential affinities of eight anti-viral drugs to each of the two binding sites were described.. Recent Cryogenic Electron Microscopy (Cryo-EM) studies on the RdRp revealed that two suramin molecules, a SARS-CoV-2 inhibitor, bind to RdRp in two different sites with distinctive interaction landscape.

Article Title: Potential molecular mechanisms underlying the ameliorative effect of Cola nitida (Vent.) Schott & Endl. on insulin resistance in rat skeletal muscles.
Article Snippet: Calculations of the partial Gasteiger charge addition and docking of the ligand were made using the AutoDock Tools GUI. (Pettersen et al., 2004; Salifu et al., 2022).



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